Software Engineer – Bioinformatics Pipelines

OnTrac

Remote regions

US

Salary range

$100–$115/hr

Benefits

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Overview:

  • OnTrac is seeking a software engineer for a 12-18 month contract supporting a healthcare genomics customer's pipeline team.
  • The role focuses on engineering pipelines, not scientific discovery, requiring quick integration and limited ramp-up.

Engagement:

  • The contract starts 2 November 2026 and is fully remote within the United States.
  • The contractor will work closely with the delivery team and customer stakeholders.

Required Credentials:

  • Professional software engineering experience with bioinformatics pipelines is required.
  • Hands-on production experience with Python, Bash, and Nextflow is necessary.

Scope and Delivery Expectations:

  • Maintain and improve software quality of genomics pipelines in an on-premise HPC environment.
  • Automate pipeline operations, provide operational support, and implement integrations with sequencing instruments.
  • Support the additional workload from the LIS transition from Soft to Epic Beaker.

OnTrac

OnTrac provides contracting services for bioinformatics pipeline engineering in healthcare genomics. The team culture emphasizes quick integration and agile collaboration on a short-term engagement.

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